YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71740281, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSITRTKCI AVALCSVALF ACQGTPGSST ATKQEGQVLA EVNGKKITSG DFSREVKNLP  60
   61 EYLRAMATTP QGRKEMLDTM VIRELILQKA SKDGLDKGPE IEEKLQELKK RLIVEAFLKK 120
  121 KVETDAQISD ADLKKFYDQN IDKFKAGEQI RASHILVKTE KEAKEILAQL KGGAAFEELA 180
  181 RKHSVDSSSA KGGDLGWFGK GAMVPAFERA ALALKEGQVS DVVKSDFGFH IIKLTGKRPA 240
  241 GTRPFDEVKD QIKAALMPSK QQEIFQKIKD ELKKSAKITV KEDALNAMSE PAQPAVPEKK 300
  301

Type	Start	End	Confidence
Signal Peptide	1	30	0.95
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	300	0.99