YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71741591, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEKVEAAQN ATVREAEQVV KKKSIVREYA ESIIIALLLA LVIRTYLVQA FKIPSGSMED  60
   61 TLAIGDHLLV SKFIYGTKIP FTDSQIIKVR DPRQGDVIVF EYPEDPSKDF IKRVVGTPGD 120
  121 VVEGRDKKVY VNGRLYRNPH EVHKEREIIP KEMNPRDSFG PVTVPANSYF VMGDNRDRSY 180
  181 DSRFWGFVSR DKIKGLAFIK YWSWDRETFR PRMGSIGTLI D

Type	Start	End	Confidence
Cytoplasmic	1	28	0.58
Transmembrane Helix	29	48	0.59
Non-Cytoplasmic	49	221	0.95