YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71741857, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHALVQWLLD TIGSMGYPGI FLLMAMESSI IPVPSELVMP PAGYLAFQGE MNMAAAILCG  60
   61 TLGSLVGAYA NYFASHYLGR PLIIRYGRYV LIPPEKFERV EHFFLRHGEI STFIGRLLPV 120
  121 VRHLISIPAG LSGMNHLRFS LYTLLGAGIW CTILTGIGYV IGENQQLIMR YSHQALLWVV 180
  181 IFSIALISVY IWRQRRRSGI KA

Type	Start	End	Confidence
Cytoplasmic	1	10	0.79
Transmembrane Helix	11	31	0.85
Non-Cytoplasmic	32	52	0.81
Transmembrane Helix	53	73	0.95
Cytoplasmic	74	138	0.91
Transmembrane Helix	139	161	0.92
Non-Cytoplasmic	162	173	0.81
Transmembrane Helix	174	192	0.97
Cytoplasmic	193	202	0.93