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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|84390277, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.27
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNARQFAFW VVLLLLIVAL FNLFSGSGGT LQSREIAYSD FVTAVESGNV SSVTLDGEQV  60
   61 RYRGTDGQDY VTIKPEDATL TDTLIQNDIP VTAKSQEESG FQSFLVSLLP ILLLIGVWIY 120
  121 FMNRMQGGGK GGAMGFGKSK AKMLTEKHGR VTFDDVAGID EAKEELEEIV EFLRNPQKFS 180
  181 RLGGKIPKGA LLVGPPGTGK TLLARAIAGE AGVPFFTISG SDFVEMFVGV GASRVRDMFE 240
  241 QAKKNAPCIV FIDEIDAVGR HRGAGYGGGN DEREQTLNQL LVEMDGFESN EGVIILAATN 300
  301 RRDVLDPALL RPGRFDRQVT VPNPDIKGRE KILGVHARKT PLGPDVDLRI IARGTPGFSG 360
  361 ADLANLVNEA ALMAARVGRR FVTMVDFENA KDKVMMGAER RSMVLTPDQK EKTAYHEAGH 420
  421 AVVGLTLPKC DPVYKATIIP RGGALGMVVS LPEIDRLNWH KSECEQKLAM TMAGKAAEII 480
  481 KYGEGDVSNG PAGDIQQASA LARAMVLRWG MSDKVGNVDY EQAHEGYMGN GAGGFSVSAH 540
  541 TKELIEEEVK RMIEDAYNHA YKILTERQEE WERLAQGLLE YETLTGDEIK RVMNGEPPNS 600
  601 EDEDEGSDEG SAPSVTAIPK TKPKPKPGGS GGLEPEPTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle