YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84391182, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMTEKPSHF VFVLLHNFSL LSFSSALECL RIANRMAGRQ IFTWEVQSET GDTVTCSAGT  60
   61 IFASETRLGE LSRDDTVVIC AGLNVQEATT KPVLNWLRRE ARKGLRIGGL CTGAYTLACA 120
  121 GLLDGKRATI HWENHDSFAE EFEDVKLTKS VFTVDGLRMT TAGGTSSIDL MLKLIADQHG 180
  181 EELANSVADQ LIYSSIRTDQ DTQRLSVPTR IGVRHPKLSQ VIQMMERHIE EPISPAVLAR 240
  241 DVGMSTRQLE RLFRRYLNRS PKRYYMELRL QKARNLLMQT DMSVINVALA CGFSSPSHFS 300
  301 KCYRAQYETT PYRERGSHAA RLSV

Type	Start	End	Confidence
Signal Peptide	1	26	0.83
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	324	0.96