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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|118502525, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLCPAAFE EETRMNWFGN LKVGTKLLSA FGAVLILTTL LGIFGIYQIG RVNRGTEALG  60
   61 SNWMPSTNRV ADLHAHLNKF RRSEFQHILS TTPEEMDKYE KRMDTTLESI KSVDAAYQKL 120
  121 LSDPEERKLY DSYVRILALY FAESRKLVEL SRQGRNQEAR DLLRGNSASY LAEAEADLNK 180
  181 LIELNVKGGQ DEYQRAVELY NSSKVTIVVT LIVCVAIGMV LAFAISRMIT VPLVAGVDAA 240
  241 NRIASGDLTV DVRSSSSDEV GQLMSAMKHM VENLRTMIAR TVEIAGSIAS ASTQLQSTSE 300
  301 QIATGAEEVA NQTNTVATAS EEMSHTSTDI ARNCSMAADA SRQTTESAND GARVVHETIT 360
  361 GMNIIAERVQ QSSRTVEALG ARSDQIGQIV GTIEDIADQT NLLALNAAIE AARAGEQGRG 420
  421 FAVVADEVRA LAERTTKATR EIGEMIKSIQ NETREAVRAM GEGVREVEKG TESSRKSGQA 480
  481 LEDILGRINE VGMQINQIAT AAEEQTATTS EVSMNIQQIT EVVHQSARGA EETANAASQL 540
  541 AQQANDLQGL VSSFRLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle