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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|118502571, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQETRQTALT APTTRRRIGH FKPKRIVLRL TLTFSALIVI TLGLFILVNM PFQRRATLEA  60
   61 MESEARSTVT SIDQVTASAI ITEDFGTVVE HCLRVVRESP SISYVVVTRN DGFSLVITKT 120
  121 GWSQNSLKGV WLPTGERVAG SRFLKSDFAP HEVYHYSHPF QYSGIDWGWI HIGLSLNKFH 180
  181 SDIRALYLRT GLLTLLCLSV GIVVALYFAR KITKPISSLV DTTRQVALGN LTARADIGTG 240
  241 DELEHLGRSF NIMTEQLQQT QGDMSAAREY TDNIIRSMND AMIVVSPEGI IDRVNTATLN 300
  301 LLGYDERELI GSNIDKILAS DAATGEGAAP VPDLAGLIPR GFINKVETFY RARDGRLIPV 360
  361 IFSASVMHGA GKSAQGIVCV ALDITERKQA EEALRIAKEN AEAANRAKSQ FLANMSHEIR 420
  421 TPMNGVLGML DLLMDSRLDE NQLRLASMAH GSADKLLEII NDILDFSKIE AGRFQLHMAD 480
  481 FALRETVREV ADMFWVKAQD KNIRLICQID DSVPNTVRGD GVRLRQVLIN LVGNAVKFTE 540
  541 NGQIFLGVSL METTAENTQL RFEVRDTGTG IPLDAQPYIF DAFSQADNSM ARRHEGTGLG 600
  601 LAISRELVEA MGGTIGVRSE PGTGSLFWFT LCLRHAQSIP ALLPADDAME ENSERPATQR 660
  661 TPLVLLAEDN PVNQELGRLV LESLGCKVDV VGNGRQAVEA VSDREYDLVF MDCQMPEVDG 720
  721 YEATRSIRQR EAETGEQTRH IPVIALTAHA MDGDRETCLS AGMDDYASKP FTPIQLQALL 780
  781 NRWCR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle