YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71836484, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHENIVVFIM GAGTFFILVA AIGVVRMPDI YMRLSAASKA STLGASFILA AVALFFDSTP  60
   61 VSGKVIAIIS FTLLTAPIAA HMLGRAAYLS GTPLWEKSVC DELGAAGEWD RRVKEGCSAS 120
  121 GDKHD

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.80
Transmembrane Helix	6	25	0.96
Cytoplasmic	26	35	0.72
Transmembrane Helix	36	56	0.91
Non-Cytoplasmic	57	64	0.67
Transmembrane Helix	65	84	0.93
Cytoplasmic	85	125	0.84