YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71743214, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTARQATSDR PFGISLCLSV IFHALCGVSL VWWQSLVPPP LVLQETYYVD VVNLPVASPR  60
   61 SGSPTQQGDM AEAAPPLPQA EEKAMPLPSP PKPADSGKQS KAPKTAPRNL PDVDSDSFAK 120
  121 KMAKLEGRVA SGQHESAVES LRRKVASGGS GRSGMPGGKG QEAGSDYVAY IQSRLKDAFR 180
  181 ETISYTSRAP EVVVRISLDS SGRLARKKIE RSSGDLAFER SVIAAIDRAS EKFPAPPDRR 240
  241 GFEGVFVFKP QGVSNSRP

Type	Start	End	Confidence
Cytoplasmic	1	11	0.88
Transmembrane Helix	12	33	0.88
Non-Cytoplasmic	34	258	0.99