YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91796116, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIALYTVMEG VIAFFLITGS IFALIGSLGL TRMKDFYMRL HGPSKISTLG VGCILLASIA  60
   61 YFSLLDAGPS LQELLITIFL FITAPVSAHM LSKSALHQKL ARDPRTRGNP QELQEDEEHS 120
  121 IEEAPQGDSK LP

Type	Start	End	Confidence
Non-Cytoplasmic	1	9	0.88
Transmembrane Helix	10	31	0.91
Cytoplasmic	32	45	0.84
Transmembrane Helix	46	65	0.94
Non-Cytoplasmic	66	73	0.78
Transmembrane Helix	74	92	0.95
Cytoplasmic	93	132	0.94