YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|84495064, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGDRILTEE EKAAEQRRGP AASQRGGPPH MRIGQPTEKS TNFKPSAKRL LGLLKPERLA  60
   61 LYGVLAFALA SVILNAIGPK ILGKATDLIF AGFVGKKLPS EGSVDQIVAG LRANGQDTFA 120
  121 DLVAGMPHLV PGAGIDFGAV GRVLLFVLAI YVVASLLQWA SSFILTGAVN RTIFNLRRDV 180
  181 EDKLNRLPLP YFDNQPRGEL LSRVTNDIDN VAQSLQQTLS QLLTSLLTVI AMVVMMLYIS 240
  241 PLLALIALVT IPITMLVTAA IGKRSQKHFV QQWKSTGELN GIVEETFTGH QLVKVFGRQD 300
  301 EVRASFKAKN DDLFDAGFGA QFISGIIMPT MMFIGNLNYV IIAVVGGLRV ASGSMSLGDV 360
  361 QAFIQYSRQF TQPLTQVASM ANLMQSGVAS AERVFDVLDA PEQQAESATP VVLDDPHGSV 420
  421 AFEDVSFSYV PETPLIEHLD LTVEPGQMVA IVGPTGAGKT TLVNLIMRFY ELDSGRITLD 480
  481 GVDITDLSRH NLRGEIGMVL QDTWLFGGTI RENIAYGRPD ATEAEVIAAA QATYVDRFVH 540
  541 SLPDGYDTVL DAEGGNISAG EKQLITIARA FLSDPALLIL DEATSSVDTR TELLVQQAMA 600
  601 ALRQDRTSFV IAHRLSTIRD ADLILVMENG RIVEQGSHAD LLASGGAFAE LYAAQFRAAV 660
  661 AEPVE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle