YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92115045, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPRQSGFRH LIDSTHYSLK GLRAAFRNET AFRQEVGICV ILLPLAWWIG SSPVEWLLLV  60
   61 GSCALVLMVE LLNSAVENVV DRIGPEHHEL SGRAKDIGSA AVMISLIMAG LTWVLLAWQK 120
  121 FFG

Type	Start	End	Confidence
Cytoplasmic	1	29	0.97
Transmembrane Helix	30	50	0.88
Non-Cytoplasmic	51	55	0.85
Transmembrane Helix	56	76	0.89
Cytoplasmic	77	96	0.86
Transmembrane Helix	97	117	0.96
Non-Cytoplasmic	118	123	0.78