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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|84375186, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILIFLIVS ISLAGCTQDR HQEDIEAKKA AYFQQAEQGD AHGQFNLGVM YEDGKGVSQD  60
   61 DTQAVSWYRK AAEQGHARAQ TNLGRMYKKG RGVSQDYEEA VSWYRKAAEQ GYARAQTNLG 120
  121 WMYDEGRGVS QDYEESVSWY RKAAEQGYAR AQTNLGWMYK EGRGISQDDK EAVSWYKKAA 180
  181 EQGEASAQNN LGWMYDEGRG VSQDDKEAVS WYRKAAEQGY ARAQTNLGWM YENGRGVSQD 240
  241 DKEAVSWYRK AAEQGYVRAQ TNLGWMYEKG IGVSLDNKEA VSWYRKAAEQ GHARAQNNLG 300
  301 VMYEEGRGVS QDYKEAVSWY RKAAEQGNAT AQNNLGVMYE KGRGVSQNDK EAVSWYRKAA 360
  361 EQGNATAQNN LGVMYEKGRG VSQNDKEAVS WYRKAAEQGD ASAQNNLGIM YDEGTGVSQG 420
  421 DKEAVSWYRQ AAEQGYARAQ TNLGWMYADG TGVSQDYKEA VSWYQKAAEQ GYARAQTKLG 480
  481 WMYVEGTGVS QDDKEAVLWF RKAAEQGHAL AQNNLGAMYA EGRGVSQNYE EAVYWYRKAA 540
  541 ERGHALAQNN LGAMYAEGRG VSQNYEEAVS WYRKAIEQGA MDAQYNLGLS YERGVGVIQD 600
  601 YEEAVLWFRK AAEQGHALAQ NNLGSMYVEG RGISQNYEEA VSWYRKATEQ GLALAQNNLG 660
  661 VMHEKGLGVS QDYKEAVSWY KKAVEQGHAL AQNNLGVMYG EGRGVSRDDK EAVFWYKKAA 720
  721 EQGVVDAQHN LGMSYEQGAG VSQDDKEAVY WYEKAAEQGH ARSQNHLGWM YDEGIGVSQD 780
  781 DKEAVSWYGK AAKQGLATAQ NNLGVMYAEG RGVSQDYKEA VSWYRKAMEQ GDVDAQNNLG 840
  841 VMYAKGTGVS RDEKKAVSLY TKAAEQGLAT AQYNLGSMYA EGKGVTKNDK TSYMWLKLAQ 900
  901 YNGKEGMQND FDIMTKRMTL IDVNKAKKRA KICLESDYIR CN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle