YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84375230, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPIFGRGPS LQLRLFFAVI LSASLMLADS RLDAFSNVRY LLNSMVAPIQ YAANLPRTMF  60
   61 DGVYDRFSTR KGLIESNHNI KREVLRLKSE LILLEQYQEE NKRLRKLLGS PFIRDEKKVV 120
  121 TEVMAVDTSP YRHQVVIDKG QIDGVYEGQP VINEKGIVGQ VTFVAAHNSR VLLLTDANNA 180
  181 IPVQVIRNDI RVIASGNGMI DEIQLEHIPT STDIQEEDLL VTSGLGGVYP EGYPVAYVTA 240
  241 VDYDPKREFA VIKAEPVVEF DKLRYLLLVW PDENKQMQAD QSSIEQALLE GEDGQ

Type	Start	End	Confidence
Signal Peptide	1	30	0.95
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	295	0.99