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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|84388125, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFTLPFADK LPKIPNRAMP AIGAPVMVLA TLAMVVLPIP AFLLDMFFTF NIALSMVVLL  60
   61 VSVYTRRPLD FAAFPTVLLI ATLLRLALNV ASTRVVLLHG HEGGDAAGNV IEAFGNVVIG 120
  121 GNYAVGLVVF LILMIINFMV VTKGAGRISE VSARFTLDAL PGKQMAIDAD LNAGLIDQDQ 180
  181 ARTRRFEVTK EADFYGSMDG ASKFVKGDAI AGILILFINI IGGLSIGMVQ FDLGFGEAIE 240
  241 IYTLLTIGDG LVAQIPSLLL SIAAAMMVTR QNTDEDMGQQ LFFQLFDNPK SLMITAAILG 300
  301 IMGIVPGMPH FSFLSLAVVA GAGAYYIDKK NKKKAEQPNL PATVEASGET GSQKELSWDD 360
  361 VQPVDIIGLE VGYRLIPLVD RDQGGELLER VKGVRKKLSQ DFGFLIPAVH IRDNLELTPN 420
  421 SYRLTLMGVA VGEAEIKPDM ELAINPGQVY GMIDGEPTID PAFGLEAVWI REEQREHAQA 480
  481 LGYTVVDSST VLATHLSQQL TNNASQLIGH EEVQNLLEML SRSTPKLVEG FVPDQLQLGV 540
  541 VVKVLQNLLN EAIPIRDIRT IVQTLSEYSS KSQEPDILTA AVRISLKRLI VQEINGIEPE 600
  601 LPVITLIPEL EQILHQTMQA SGGESAGIEP GLAERLQTSL SHATQEQELK GEPAVLLTSG 660
  661 VLRSTLAKFV KNTIPSLRVL SYQEIPDEKQ IRIVQAVGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle