YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84377184, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEQDAPKG KSKLLIIIIA VVVLLLGIGG ALFFFLGSDD SASESQSQPA TAVVAAEPVM  60
   61 YVNIPQPFLF NVTGDKKDRL VQIKAQLMVR GSKNEDLARY HSPLVESTLL ATFASATVDQ 120
  121 LRSPTGRIEL RDKATEDIKA SLAQAVGQPV IEKVLFTDFV IQ

Type	Start	End	Confidence
Cytoplasmic	1	13	0.97
Transmembrane Helix	14	37	0.94
Non-Cytoplasmic	38	162	0.94