YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84378759, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLIKRMWSI KSMLLIKNSS LTKSVSLTKS MSENKRTPRK QGLPSKGRGF TLIEVLVSIA  60
   61 IFATLSMAAY QVVNQVQRSN EISIERSARL NQLQRSLVIL DNDFRQMAVR KFRTNGEEAS 120
  121 SKLILMKEYL LDSDSVGIMF TRLGWHNPQQ QFPRGEVTKV GYRIKEETLE RVWWRYPDTP 180
  181 SGQEGVITPL LDDVESLEFE FYDGSRWGKE WQTDKSLPKA VRLKLTLKDY GEIERVYLTP 240
  241 GGTLDQADDS SNSDSSGSSE GNNDSSN

Type	Start	End	Confidence
Cytoplasmic	1	48	0.67
Transmembrane Helix	49	69	0.65
Non-Cytoplasmic	70	267	0.99