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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67098006, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.30
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGDRAQSAG IAAGGRAVGG RAGVKRFLRH ARHWLLLVVC LGALGAYLAY NLHGEHERVE  60
   61 ATERERLATQ SKVIEDNLSR QLVAINLALE SIMVELPDWA GRPDGRELVS RRLKSMEVSM 120
  121 PSVRTFAVLD EKGTVTASNR EELLGRNFHD RDYFQTALRA PSTKTLYVSA PFKTVLDTFV 180
  181 ISVARVITGP QGQFAGLVSA SVDPVDMQIL LNSVRYADDM RSMLVHGDGT IFVSQPALVD 240
  241 VVGKNLSVAG SFFRQHLESK RPVSYFEGKA ITTGDKRLPV LRTIQPADLT MDKPLVVSVS 300
  301 RGWDAMFAPW QRDVRSQLLV YALFGLLCMA GLIIYQRQRV QQRMINQRLK LATEATGVGI 360
  361 WEFDLKTRRY HWDLAMFGLF GLNPQTVNAL NNDWQQLLLP GELLRMKDAT RVTIKQGQAF 420
  421 DLTFQIRRQD GQVRFMRNRA VLYNDGSHAA SRLIGTTEDV TERKLREADL RVAATAFECQ 480
  481 ESIMVTDANQ LILRVNRAFT ELFGYTAQDV LGATPRVLQS GRHDPAFYAA MWDGITRGGA 540
  541 WQGEIWDRRK NGECFPVWLS ITVVCGDDGG VSHYVATHTD ITLRKAAEDD IRQLAFYDPL 600
  601 TGLPNRRLLQ DRLHQAMSQA RRERGRLALL FLDLDKFKPV NDDFGHQAGD ELLQAVAQRL 660
  661 QACVRESDTV ARLGGDEFVL LLPSIEAAQD AMAVAEKIHQ AFGRPFTLSA GRNATMSFST 720
  721 GIAVYPEHAS DEKALMRHAD EAMYQAKAAG RDRFVLFAPA SEPATLLTPA DSGGTAPTIG 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle