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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|84379644, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKRKALQLA VSVGMAAMSG AVYANGSDMT NPDSGVVVGY WHNWCDGGGY QGGNAPCVTL  60
   61 DEVNPMYNIV NVSFMKVYDV ADGRIPTFKL DPTIGLSEEQ FIDQIAELNK QGRSVLIALG 120
  121 GADAHVELET GDERAFADEI IRLTERYGFD GLDIDLEQAA VTAANNQTVI PDALKLVKDH 180
  181 YRAEGKNFLI TMAPEFPYLT TGGKYVPYID NLEGYYDWIN PQFYNQGGDG IWVDGVGWIA 240
  241 QNNDALKEEF IYYISDSLIN GTRGFHKIPH DKLVFGIPSS IDAAATGFVQ APQDLYDAFE 300
  301 TLTTQGQPLR GVMTWSINWD MGTNKNGQQY NEQFIKDYGP FVHGQVTPPP VEGEPVLKGV 360
  361 ENTRVLHGTT FDPMEGVTAT DKEDGDLTSS IDVEGYVETS AIGTYVLTYR VQDSDNNETT 420
  421 KARTVEVYSQ KPVFNGVSDT TVVLGTAFDA MAGVTANDAE DGDLTSTITH TGSVDVNEIG 480
  481 NYTLVYSVTD SANQTVTADR KVSVTDGSNC AAAWDADTVY VEGDQVSHDG STWGAGWYTR 540
  541 GEEPGTTGEW GVWRKVSDSS CGGNPDPGDD LELAVSGLQS EYAPDNGNVR LDLTLTSNEA 600
  601 LDVTAMVLNS AGTVVEQTQV NLTDSRAITM DLYDVAEGQY ALEVVGKASD GEMVMVNDSF 660
  661 AVKDGGGTTP PPGDYPPYEA GTNYAAGDIV VGSDNGLYEC KPWPYTAWCA SASYAPAESQ 720
  721 YWQDAWTKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle