YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116691939, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLIAAVSI ALLAVSAGPA VAKDWTTIRF GTDASYAPFE SKAPDGKLVG FDIDLGNEIC  60
   61 ARLKAKCVWL ENDFDGMIPA LKAKKFDAVL SSMSITPQRA QQIGFTTKIY NQPTRLVVKK 120
  121 GSSLLPTAAS LKGKSIGVEQ GTTQETYAKA YWGKQGANVV SYQNQDGVYA DLIAGRLDAA 180
  181 LQDEVQAAIG FLKSPRGANY TFVGPELVDE KVLGIGAGIG LRQEDTDLKA KIDRAIHDMV 240
  241 KDGTYKRLAS KYFDFDIYGG

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	260	0.99