YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67655741, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKCPASFTR GLWPVGPAGQ PAASGLPARA AISAGRQTIH DMTETVALKI VQRIATELSV  60
   61 QPRQVAAAVQ LLDEGSTVPF IARYRKEVTG NLDDTQLRNL EERLLYLREL EDRRAAILSS 120
  121 IDEQGKLTDE LRAAIDAADS KQVLEDLYLP YKPKRRTRAQ IAREAGLEPL AQALLANPLL 180
  181 DPQAEAAAYV DADKGVADVK AALDGARDIL SEQFGETAEL LGKLRDYLHN QGVVSSAVVE 240
  241 GKENEEGEKF RDYYDYAETI KTVPSHRALA LFRGRNAGVL TIKLGLGEEL DAQVPHPGEA 300
  301 MIARHFGIAN QNRPADKWLS DVCRWCWRVK VQPHIENELL TQLRETAETE AIRVFARNLN 360
  361 DLLLAAPAGP KAVIGLDPGL RTGVKVAVVD RTGKVLATDT IYPHEPRRDW DGSIAKLARI 420
  421 AAQTQAELIS IGNGTASRET DKLASELIAK HPELRLQKIV VSEAGASVYS ASELAAKEFP 480
  481 DLDVSLRGAV SIARRLQDPL AELVKIEPKA IGVGQYQHDV NQRELARSLD AVVEDCVNAV 540
  541 GVDANTASAP LLARVSGLNA TLARNIVDYR DANGPFPSRE HLRKVPRLGD KTFEQAAGFL 600
  601 RINGGENPLD RSSVHPEAYP VVERMLAKIN KRIDDVLGNR EALSGLSPTE FVDERFGLPT 660
  661 VRDILAELEK PGRDPRPEFK TATFREGVEK VSDLVPGMML EGVVTNVAAF GAFVDIGVHQ 720
  721 DGLVHVSAMS TKFIKDPHEV VKAGQVVKVK VIDVDVKRQR IALTMRLDDD AAAPGMTSRG 780
  781 GQDRGNAGRG AARPQRSREP EPAGAMAAAF AKLKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle