YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSD_BURCA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYPHPIIAR EGWPFIAIAA VVALLIHAVG GFGFAWPFWL LLVFVVQFFR DPQRPIPAQP  60
   61 NAVLCPADGR IVAVETAQDP YANREALKIS VFMNVFNVHS QRSPVDGAIS KVEYFPGAFL 120
  121 NAAIDKASTE NERNAVVIQT ASGKTVTSVQ IAGLIARRIL CYVRAGEPLS RGQRYGFIRF 180
  181 GSRVDVYLPL GSRAKVSIGE KVYASSTILA ELEQ

Type	Start	End	Confidence
Cytoplasmic	1	14	0.73
Transmembrane Helix	15	40	0.89
Non-Cytoplasmic	41	214	0.73