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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116651457, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNNQPVTQQ EFDFPDDVTL MSTTDADSVI TYANTTFAQV SGFSNEELVG QPHNVVRHPD  60
   61 MPKEAFADMW ATLRRGEPWT ALVKNRRKNG DHYWVRANAI PVMRNGAPQG YMSVRTKAPH 120
  121 DETRAADALY RAFREGKAGR RRFHKGLVIR TGLLRIASLP QTMSVRARVH SALYVLAPAV 180
  181 VGAGWACGLT GGGLAAFAGV TVGVAAAAGW WLDAQIVQPL KRLHEQALNV ATGESRRGVR 240
  241 MNRVDEIGMT LRTINQLGLM FRWLVDDVSE QVHNVQRASN EIAQGNGDLS ARTEQAASSV 300
  301 QQTAASMAEM TATVSSNAET ALQANQLSVS ASDAAERGGQ AVSEVVTTMS EITASSRKIA 360
  361 DIIGVIDGIA FQTNILALNA AVEAARAGEQ GRGFAVVAGE VRALAQRSAN AAKEIKTLIS 420
  421 ASVERVESGA RIVDGAGKTM EDIVTQVKRV SDLIAEISSS TAEQSTGVAQ VDQAVVHLDN 480
  481 ITQQNAALVE QSTAASESLK QQATRLVDAV NVFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle