YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67665053, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSMRSRVM AGAVACAMSV APFAATTALM TLATTHTAMA ATAPADNYAA TRYPIILVHG  60
   61 LTGTDKYAGV LEYWYGIQEN LQQHGATVYV ANLSGFQSDD GPNGRGEQLL AYVKTVLAAT 120
  121 GATKVNLVGH SQGGLTSRYV AAVAPDLVAS VTTIGTPHRG SEFADFVQGV LAYDPTGLSS 180
  181 TVIAAFVNVF GILTSSSHNT NQDALAALKT LTTGQAATYN QNYPSAGLGA PGSCQTGAPT 240
  241 ETVGGNTHLL YSWAGTAIQP TFSVLGVTGA TDTSTIPLVD PANVLDLSTL ALLGTGTVMI 300
  301 NRASGQNDGL VSKCSALYGK VLSTSYKWNH IDEINQLLGV RGAYAEDPVA VIRTHANRLK 360
  361 LAGV

Type	Start	End	Confidence
Signal Peptide	1	40	0.86
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	364	0.99