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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71550811, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPRCKHYPA ALNIFYFAII MAVSMLSNAV HAQTTSAGTK SESRLASADL KEITVTATRT  60
   61 SRKVSEVPES VSVVDTEQIR TRQAADIGDV LRYLPNVELG GGPRNLGLSP VMRGMGDDRI 120
  121 LFLLDGARQD FNRGHNARIF TDPSLLKRVD VMRGPASTVW GSGALGGVIS LTTLDATDLL 180
  181 RSGERFGMKV RGGFQSMNEQ YIPGISAYGL VGEQFDYLLD FSYRNAADDI RHGDGSKLQN 240
  241 SRFESYASLA KFNWTPGDHR FTFSAQTFDQ AGKVPSNPQA ASTANTLVDR DTEQRNYTLR 300
  301 YRYENVDNAW LNPEVLVYHN TTYSLEKRLF DRRRDETDFS TTGINARNSS RLELNSFTTQ 360
  361 LITYGVDYFH NEAKGKRNGA TRPEFPRGEA DVVGLYLQDE ITLWERLSLI PGIRWDYFSS 420
  421 KADGISVSSN QNDRVNFKLG GLLKVTEWFS ITGGYSEAFR APTLGELFTT GTHFTCGPRC 480
  481 SNLFTPNPDL KPETAFNKEI GARIQKSNLL FENDQLTMRG TYFHNKVKNF VDLMVDFVFR 540
  541 PVPGNPGRGG TTTSDNVHDA LLKGFEIETS YAAKYSYTGF SYAQTRGHNR TSGGVLSNVQ 600
  601 PDKWIVMAGL NWPTHDLSLG WRSSIVSAQH RVPTGGTPTP GYTLHDLTLT WLPQNGPAKG 660
  661 LRFDFGIDNL TDKDYRRHLN VLKDPGRNYK LAVSYQF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle