YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71484123, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVSISKGFT MVELMITISI ASILLAVAVP GYQSLMRESR LTAQANELMT ALHYARSEAV  60
   61 KRGGRITICK SPDGATCNDG SWQDGWLVFS DAGTAGAVDS DDEILRVFPK LNGSSLKGGG 120
  121 NFSSRISYLR NGRSQGNNNL PNGTFTLCNQ NDARKIVINV SGRARVEKAG CPSNKEFLDE 180
  181 SKNDG

Type	Start	End	Confidence
Cytoplasmic	1	8	0.73
Transmembrane Helix	9	32	0.82
Non-Cytoplasmic	33	185	0.80