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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71550688, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKTVLSVIR AWMFMACFLC MLIRAESAGA TLPLSDVPLF LTTAVDPNVI FTLDDSGSMQ  60
   61 FEIMPDSLIK SSVRFVYPRV SSTYGGDSYS NYVVGFDLNN KYTASLRSSH VNKIYYDPTV 120
  121 RYLPWSKADG SLMDNASITC APHNPFNTAA GCRNLTVDNT QSAAWLKDNG SLTDTESQTF 180
  181 YPAVYFRYKG SGNYNLASSY AQVEIKPENA PFNGGENRTD CADSSACIYA EEIQNFANWY 240
  241 TYYRSRILLA RAGVGRAFAA QGNSMRVAFG AINKGSSSSN KIDGISTSTL ITGVRQFAGQ 300
  301 EREDFFNSLY NHIIPAANTP LRRAMQSVGE YLKRADDKGP WSTTPGQSGG SQPVCRQNYH 360
  361 VLMTDGFWNG PNPSEIGNAD NTDGSKLTNH FPNTSPATYQ YKPALPYKDG FSNTLADVAM 420
  421 HYWKTDLRTD LDNKVPTNAN DLAFWQHMVN FTVGLGVEGT LGDLLPGSSG GPAAWPDPTD 480
  481 ADAYKIDDLR HAAVNSRGEF FSAQDPAAFA AGLTNALTNI TARVSSAAAV TTNTSRLNTG 540
  541 AQIYQAKFNS ADWSGQLLAF NLEADASLGL LQWEASEQLP EHASRKIFTH NGTAGLAFSI 600
  601 ANFSSFSAAQ QTALDTSTNG VNDDQGLQRL AWLRGDQTTE VGQGGTFRKR NNGVLGDIVN 660
  661 SDLLFVKTLD FGYDAFLDGT PGKASYYAYV QSNNSRIPMV YTGANDGMLH AFSAETGKEL 720
  721 FAYIPAAVYP QLSKLTDSGY VHRYFVDGNT YVGDAYIGAT PAWKTVLLGT LGGGGKSIFA 780
  781 LNITDPANFS ASDVMWEFTD VDLGFVHGQA KIARLNDGSW AAIISNGYNS TSDKAYLLIV 840
  841 DLQTGALIKK IPTNNSTNNG LSSPALVDTN NDKIIDVVYA GDLQGNVWKF DLSKNSSAQW 900
  901 DVAYKSGSVG VPLFTARNTS NQVQPITSPL EVGYHKQGGY MIFFGTGQFI ASGDATDKKV 960
  961 QSLYGIWDNS SWISETDRSV LQPQTILTET VVPPFERTIS DNGIDWSAKR GWYIDLLQPP1020
 1021 EGTQQGERSV VMPMLNFGRI IFTTLIPSID PCEAGGRNWL VLLNAENGGM ISPPQFDTNG1080
 1081 DGKLDGSDRI IAAVGSDGIR SESVAISAGS LTHLIAATTT GAVEKVTISN GAPPPRRSWK1140
 1141 QIQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle