YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71549805, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFGDSTRYQ SKTAMTEINV VPLVDVMLVL LIIFMITAPL LTHSVKVDLP KASSTLNQTQ  60
   61 PEHIEFAIHA DGSFYWGGEP VTLDQLPARF AEAVKQSDKT ELHIRADRDT HYELVTKVMS 120
  121 IAATAGLARI GFVTDPTENQ P

Type	Start	End	Confidence
Cytoplasmic	1	19	0.64
Transmembrane Helix	20	41	0.89
Non-Cytoplasmic	42	141	0.69