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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114331388, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSNTSDLLH LVPADFPSAW NRQIEPTLIN HEQVIAWLET DLDHQLHFSP GLIVITTRRI  60
   61 LARIAGDEHW QAWHYQPNMK LAYQDHAGIC SIELSDTSAR LARWYCTLSK QQAADQLIIH 120
  121 FIRLIDALDT QAALPAKGMA EQASSNQNTA GNDDSSEAAY AHHDQEATST PPSTWTLFRL 180
  181 WRFARPYKWQ LFTGFMLMLG STAAALVPPY LTMPLMDNVL IPYQNGHPIN VDLVIFYLSG 240
  241 LLGAAIVAWI LGWARTYVLA RISERIGADL RTTTYEHLLK LSQAYFGGKR TGDLMARIGA 300
  301 ETDRINLFLS LNLLDFATDV LMIVLTVIIL VSIDPWLALI TLLPLPIIAW LIHLVRDRLR 360
  361 VGFEKTNRVW AEVNNVLADT LPGIRVVKAF AQEVREIERF RAVNQRNVEI NDRVNKVWAL 420
  421 FTPTVTLLTE CGLLVVWIFG IWQVSQDHIT VGVLTAFLAY IGRFYLRLDS MSRIVSATQK 480
  481 AAAGTKRIFD ILDHVSSVPE PVKPVHLPAI KGHIELRNVG FRYGTRRVIQ NFNFAIEPGE 540
  541 MIGLVGHSGS GKSTLINLIC RFYDVTEGAI LIDGIDIRSL PIADYRKHIG LVLQEPFLFF 600
  601 GTIAENIAYG KPDASRKEII TAARAAHAHE FILRLPYGYD SLVGERGQAL SGGERQRISI 660
  661 ARALLIDPHI LILDEATSSV DTQTEQEIQG ALDNLVSGRT TLAIAHRLST LQEANRLIVL 720
  721 DHGKIVETGN HAELMACQGH YYHLYQSQSR SPDNEESSVE PGNLSDIRGN RV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle