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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116751398, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGRVPDEVK PGIIGRFFRA VCLLIVFLHA LHGTALGDCG PLTKAADDRF AGAEDSYAAG  60
   61 RYREALELLD QALSTDIYCR PEKAHLELIG LAATYEALGD YAMALETHRR DLELAIRIFG 120
  121 ADNPDTAVSH NNLGRMHRYM GQYPEALAHL EKALVILIRS SGPDQPDTAV SYNNAASVYE 180
  181 EAGNYKKALE YYEKSLSIRL KVFGPEHPAT ATAFNNLGGI YKAMGQYEKA LENLNKALPV 240
  241 YIKTYGPEHS GTAITYNNIA SVHKALGQYP EALEHYRKAL EIDLKTSGPD HPATAVTYNN 300
  301 IASTHESMGE FEKALPYFDK ALSIQLSRLG SDHPATARTY NNLGSVYQST GECSRAIEYY 360
  361 RKALPAALRS GDAQLQWNVL AGMSSTFSKL GNPNVAILFG KQAINAIQAM RSSMASMDMS 420
  421 LRTSFIRDKE NVYKRLATLL TNMGRIPEAQ QVMDLLKEEE FFEFVRGMEV PKAGEGIGYS 480
  481 EAEKPWVEKF AMISDQIAQR GAEYAEIRRK AKSSELTEED RKKQKEILSD LETASRTFEA 540
  541 FIDRISAEFE KTAGEKAAEL TEKSLRDLKS FQSLLRYLGN GTVVVHYLVT EKKLIVILTT 600
  601 SETQLARETN VSAIELNHMI SDLRKDLLCP SKDPRPASRK LFTAVLGPIS RDLEQAGATT 660
  661 LLLSLDGALR YIPFSCLYDG RKYLIERYTP VVFTPASRDR LRDSPSLSWQ VAGFGVADKV 720
  721 SDHFRALPSV RYELHSIVGQ EGKGGVLPGI VKLDGEFTVD AMREALLRDY PVVHIASHFV 780
  781 FQPTAEESFL LMGDGSQLTL DKIKHQGFRF DEVDLLTLSA CETGLGARDA DGREVEGFGV 840
  841 LAQRSGAKGV IASLWSVADR STGLLMKKMY EARAGNPSTN KAECLRRAQL ELLRGEEEKE 900
  901 PSSEPPSQQE AGQSRDCGGR NSPSFETPPS APYAHPYFWA PFVLMGNFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle