YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|194562835, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYPHPIIAR EGWPFIAIAA VIALLIHAVG GFGFAWPFWL LVVFVVQFFR DPQRPIPAQP  60
   61 NAVLCPADGR IVAVETAHDP YANREALKIS VFMNVFNVHS QRSPVDGAVT KVEYFPGAFL 120
  121 NAAVDKASTD NERNAVVIQT ASGKTVTAVQ IAGLIARRIL CYVRAGEPLS RGQRYGFIRF 180
  181 GSRVDVYLPL GSRAKVSIGE KVFASSTILA ELEQ

Type	Start	End	Confidence
Cytoplasmic	1	14	0.73
Transmembrane Helix	15	40	0.89
Non-Cytoplasmic	41	214	0.71