YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84362309, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMNTGFSDD DDDGVMSEIN MTPLVDVMLV LLIIFLVTIP AMQHAVKIDL PHASSQPVDE  60
   61 KPQTVDVAIQ GNGTILWNDQ AVTREQLQAH IAEAAKQQPQ PELHLRADRK IAYERVAEVM 120
  121 SDAQAGGLTK LGFVTEPSTK AK

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.63
Transmembrane Helix	21	42	0.81
Cytoplasmic	43	142	0.59