YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84361847
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNMLINCAA YQDGRKLADI DVDAISDYVS KPECFVWVAL KDPTPDEIAL MGEEFGLHEL  60
   61 ALEDARKGHQ RPKIEEYGDS LFAVLHTVEL DEDGEFKVGE LNVFVAPNYV LSIRNHTEQD 120
  121 FRAVRQRCER EPHLLQEGSA FVFYALMDQV VDRYFPILET LGNELEALED RIFAKATPAS 180
  181 SRAIIEDLYS LKRRLVMLYQ HTAPLIEPLA KLTGGRIPQI CSGMEHYFRD VYDHLQRIVK 240
  241 TIEGRREMVV TAIQVNLGMI SLAENEVTKR LGSFAALFAI PTMIAGIYGM NFANMPELHL 300
  301 KYGFYGCIGV MVVADLALWW RFKRAGWL

Type	Start	End	Confidence
Cytoplasmic	1	270	0.90
Transmembrane Helix	271	292	0.89
Non-Cytoplasmic	293	301	0.72
Transmembrane Helix	302	322	0.92
Cytoplasmic	323	328	0.89