YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|254252369, gi...
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDYIRDGQE IYRQSFATIR AEADLSRIPP DLEKLAVRVI HACGMVDVVY DLRFSAGAGT  60
   61 AGRTALAAGA PILCDARMVA EGITRARLPA GNRVICTLGE PDVPDLARRL GNTRSAAALE 120
  121 LWRPHLAGSV VAIGNAPTAL FHLLDMLDAG APRPALIVGF PVGFVGAAES KAMLDADSRG 180
  181 VPYVALLGRR GGSAMAAAAV NALATEAE

Type	Start	End	Confidence
Cytoplasmic	1	121	0.70
Transmembrane Helix	122	143	0.64
Non-Cytoplasmic	144	150	0.81
Transmembrane Helix	151	168	0.60
Cytoplasmic	169	208	0.42