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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71489589, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPAHKIFD LAADDRMEDG DGIEPLENRA EETTVLRPRI ARDAVPIDGR TGTEDGAEKK  60
   61 EPLSFKIQSD ESGILRPVFP KAGNSTGVAR FFLSPPKTIP VVDGVRPQVK GKFLFVGDDK 120
  121 FYVRGVTYGP FRPEEDGCEY HTPEVVDKDF AQMAANSINA VRTYTVPPRW LLDIAQKHGL 180
  181 RVMVGLPWEE HIAFLDSKKM ARDIERRVRL GVKECAGHPA LLCLTIGNEI PASIVRWYGA 240
  241 RKVENFLKRL YEAAKAEDPE ALVTYVNFPT TEYLQLPFVD FVSFNVYLET REKLEGYLAR 300
  301 LQNLAGEKPL VMAEIGLDSI RNGVDVQAST LSWQIRSTFA TGCAGMFVFS WTDEWHRGGF 360
  361 DIDDWGFGVT DRDRNPKPTL DAIRKAFAEI PFAPDLEWPS ISVVVCSYNG SRTIRNCLDG 420
  421 LRRLDYPNFE VVVVNDGSTD GTGEIAAEYG FKVINTTNHG LSSARNTGMR AAKGEIVAYI 480
  481 DDDARPDPHW LTYLAYTFLT TDHVGVGGPN LPPPEDGPIA ACVANSPGGP IHVLLTDQEA 540
  541 EHIPGCNMAF RKSALEAIDG FDHRFRIAGD DVDLCWRLQK KGWTLGFNPA AMVWHHRRNS 600
  601 VKAYWKQQKN YGKAEAFLEK KWPEKYNAAG HVPWAGRLYF KGFEQLLSWS RGRIYQGTWG 660
  661 SALFQSIYQP APTLLWSLPM MPEWYAIIAA LAVFSVLGIE WSPLLLALPL LLFAVFVPVL 720
  721 HACMCAMHVD FSQHGGSRRQ VFKLRVLTAT LHLMQPLARL VGRVRLGLTP WRNCSVPGIA 780
  781 QPWPWPRMFT VWSEQWRSPL DWLESLESGI RGLRTVVLRG GDFDRWDLEL RGGLLGSVRV 840
  841 LMAVEEHGGG RQFVRVRTWP RCSTAGIAVT LLFGFLAACA ALSHAWMACG LFYAIAFLFM 900
  901 IWIVKECSAA MSVMVRLLGT ENDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle