YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116697047, gi...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNPPEKNTG SKRTKSLLRE YTEAIGIAIL LALFIRAFVV QAFKIPSGSM KTTLLIGDHI  60
   61 LVNKFVYGIR LPILNKEILH FSNPKRRDII VFQYPVDPSK DFIKRVIGEP GDTVKIIDKK 120
  121 VYVNDQPLDE PYTVFTDPKI QPAGVSPRDN MGPVAVPPDS LFVMGDNRDE SYDSRFWKFV 180
  181 KLDALRGEAF IIYCSWNQDG ELSLSSSESY IRWNRIGKLL H

Type	Start	End	Confidence
Cytoplasmic	1	20	0.84
Transmembrane Helix	21	40	0.86
Non-Cytoplasmic	41	221	0.90