YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84360756
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYHKAVLMA AALCAFASGA QAQETGTLKK IKDTGVIALG HRESSIPFSY YDQNQQVVGY  60
   61 SRDFQMKVVD AVKKKLNLPN LQVKNIPVTS QNRIPLVQNG TVDIECGSTT NNLERQQQAA 120
  121 FSNTIFVIGT RLMTKKDSGI KDFADLKGKT VVTTAGTTSE RLLRKMNNDK QMGMNIISAK 180
  181 DHGDSFNTLE SGRAVAFMMD DALLAGERAK AKQPGEWVIV GTPQSEEAYG CMMRKGDTEF 240
  241 KKVVDDAIAQ VEKSGEAAKI YAKWFENPIP PKGLNLNFPL SDSMKKLYAN PNDKALD

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	297	0.99