YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84360685
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSLLALVA LGAFAGAAHA QSSVTLYGII DEGFIFNNNA KGQHLYGLSS GVMQGSRFGL  60
   61 RGTEDLGGGL KAIFTLENGF DVNSGRLGQG GLMFGRQAYV GLSSQYGTVT LGRQYDSVVD 120
  121 FVGPLEAGDQ WGGYIAAHPG DLDNFNNAYR VNNAVKYTSP TYGGFSFGGL YSFGGQAGQF 180
  181 SKNQVWSLGA GYNNGPLVLG VGYLNARTPA NFGGMFNNGS TAATTAVSSP VYGAYANSAN 240
  241 TYQVIGAGGA YTFGAATIGA TYSNTKFKGF SAGPFVNQTA TFNNGEINFK YQLTPALILG 300
  301 AAYDYTQGSK IDGNSAAKYH QGSLGVDYFL SKRTDVYVIG VYQHASGNTL DASGNVVQAH 360
  361 ASINGLDPSS TSNQVAARVG IRHKF

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	385	0.98