YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|254245392, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLINCAAYQD GRKLADIDID AISDYVSKPE CFVWVALKDP TPEEIDLMGE EFGLHELALE  60
   61 DARKGHQRPK IEEYGDSLFA VLHTVELDED DEFKVGELNV FVGPNYVLSI RNHTEHDFRD 120
  121 VRKRCEREPH LLREGSAFVF YALMDQVVDR YFPILETLGA ELEELEDRIF AKATPASSRA 180
  181 IIEDLYSLKR RLVLLYQHTA PLMEPLAKLT GGRVPQVCSG MAAYFRDVYD HLQRIVKTIE 240
  241 GRREMVVTAI QVNLGMISLA ENEVTKRLGS FAALFAIPTM IAGIYGMNFA NMPELHLKYG 300
  301 FYGCIAVMAI ADLALWWRFK RAGWL

Type	Start	End	Confidence
Cytoplasmic	1	267	0.90
Transmembrane Helix	268	289	0.89
Non-Cytoplasmic	290	298	0.72
Transmembrane Helix	299	319	0.92
Cytoplasmic	320	325	0.90