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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|105892561, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSKAAVWLV IALVLFTVFK QFDKPRVQEG VSYSQFMDDA KNGKVKNVIV QGRNLTVTPA  60
   61 DGQKYQIVSP GDIWMVGDLM KYGVQVSGKA DDEPNALMSA LYYLGPTILI IVFWFYMMRQ 120
  121 MQGGGKGGAF SFGKSRARLI DENNNAVNFS DVAGCDEAKE EVSELVDFLR DPQKFQKLGG 180
  181 RIPRGVLLVG PPGTGKTLLA RAIAGEAKVP FFSISGSDFV EMFVGVGAAR VRDMFEQAKK 240
  241 HAPCIVFIDE IDAVGRHRGA GMGGGNDERE QTLNQMLVEM DGFEANSGVI VIAATNRSDV 300
  301 LDKALLRPGR FDRQVYVGLP DIRGREQIMR VHLRKVPIAN DVDAAVIARG TPGFSGADLA 360
  361 NLVNEAALFA ARRGKRIVEM QDFEDAKDKI FMGPERKSAV IREEAKRATA YHESGHAVIA 420
  421 KLLPKADPVH KVTIIPRGRA LGVTWQLPEH DNETYSKDYL LDRLAILFGG RVAEELFMNL 480
  481 VSTGASDDFN KATQTARAMV ARFGMTDALG PMVYVDDEND ASPFGRGFTR TISEATQQKV 540
  541 DSEIRRVLDE QYNLARRLLE DNRDKVEAMT AALMEWETID ADQINDIMEG RPPRSPKSSP 600
  601 AVGGDSSGGG SAEVKPGSAP APATPAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle