YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|170733561, gi...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMNTGFSDD DDDAVMSEIN MTPLVDVMLV LLIIFLVTIP AMQHAVKIDL PHASSQPVDE  60
   61 KPQTVDVAIQ GDGTILWDDH TVTREQLQAR IAEAAKRTPQ PELHLRADRK VAYEHVAEVM 120
  121 SDAQAGGLTK LGFVTEPGAK AK

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.58
Transmembrane Helix	21	46	0.75
Cytoplasmic	47	142	0.54