YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84354004
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHHAKERTMK RLIAAVSIAL LAVSAGPAVA KDWTTIRFGT DASYAPFESK APDGKLVGFD  60
   61 IDLGNEICAR LKAKCVWLEN DFDGMIPALK AKKFDAVLSS MSITPQRAQQ IGFTTKIYNQ 120
  121 PTRLVVKKGS SLLPTAESLK GKSIGVEQGT TQETYAKAYW GKQGANVVSY QNQDGVYADL 180
  181 IAGRLDAALQ DEVQAAIGFL KSPRGANYTF VGPELVDEKM LGIGAGIGLR QEDTDLKAKI 240
  241 DRAIHDMVKD GTYKRLASKY FDFDIYGG

Type	Start	End	Confidence
Signal Peptide	1	30	0.99
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	268	0.99