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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124876188, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEPLASAAL QTIELNVDGM HCGGCTGRVQ RALAAVPGVV DAAVDLDAHT ATVTAQETVA  60
   61 PDQLVNAVHQ AGYRAAVRDA AGEAVARPHA AHMTADATPS APAAATTIEL DIDGMTCASC 120
  121 VSRVEKALVK VPGVTRASVN LATERATVDA SAGVSATQLA DAVKQAGYGA TPTASDIDVP 180
  181 ALAPTLPTAP ASIELDIDGM TCASCVSRVE KALAKVPGVT RASVNLATER ATVDASDDVS 240
  241 AAQLVDAVKQ AGYGATPTAV AAPPATPASA DVELDIGGMT CASCAGRVEK ALAAVPGVAR 300
  301 ATVNLATERA SVHGAGALDA ATLIAAVTTA GYRASLPAAS SASAPAGADL QPASPAQDPD 360
  361 ARKRREAIRE RNLVIGAAML SAPLVAPMLA APFGIDLMLP GWLQLVLASI VQFGFGARFY 420
  421 RAAWHAVKAR TGNMDLLVAL GTSAAYGLSL WMLLRDPAHP GHLYFEASAV IVTLVRFGKW 480
  481 LESRAKRQTT EAIRALNALR PDRARVVEHG VERDVPLSQV RVGTRVGIRP GERVPVDGRI 540
  541 VSGRSHIDES LITGESLPVP KDDGDAVTAG SINGEGALVV ETTAIGAETT LARIIRLVES 600
  601 AQAEKAPIQR LVDRVSEVFV PAILGIAVLT LIGWLIAGAG TETAILNAVA VLVIACPCAL 660
  661 GLATPAAIMA GTGVAARHGV LIKDAQALEL AQRTTVIAFD KTGTLTEGKP SVTAFDAVGV 720
  721 PRAEALALAA AVQRQSDHPL ARAVVAAHDA DVAAQGGAAE SVVATDARAV AGRGVEAHVG 780
  781 GQQLALGSTR WRDELGIAVP PALDAHAAEL ERAGNTISWL MRADTPRAVL ALIAFGDTVK 840
  841 PGARDAIAAL SARGVASALV TGDNRGSAAA VAAALGIGEV HAQVLPDDKA RVVAELKRTH 900
  901 GGIVAMVGDG INDAPALAAA DVGIAMATGT DVAMHTAGIT LMRGDPALVA DAIDISKRTY 960
  961 RKIQQNLFWA FVYNLVGVPL AALGLLNPVI AGAAMAFSSV SVVTNALLLR RWKGRAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle