YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145220328, gi...
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFLTSKRLI TTALILLVIL NVSLLSVLWW QNMHTPRPAP VTHTREISRS VYFSIPLSLT  60
   61 QQQTESFREL RKEHFHKVRP EMEAIANLKA ALVEESFNTT PDTIKIANMA LALGSRQAKI 120
  121 EQELAMHFHD LAEVCTPGQR DSLKTVLEQL ATKKFVLRQS RWNSHAQRAN P

Type	Start	End	Confidence
Cytoplasmic	1	8	0.55
Transmembrane Helix	9	30	0.62
Non-Cytoplasmic	31	171	0.90