YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84325874, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKISVFGSGY VGLVQAAVLA EVGHDVLCMD IDRNKVERLA QGLASIYEPG LDALLREGLD  60
   61 SGRLRFSSDA RLAVEHGRVQ FIAVGTPPGE DGAADLGAVF AVADAIAEHR RKPVIVVEKS 120
  121 TVPVGTGDRL RAHIERRLEA DGRKLEFEIV SNPEFLKEGS AVADCRRPDR IVVGCDNEEV 180
  181 RQVMRELYEP FNRNHDRLLF MGLRSAELTK YAANGMLATK ISFINQIAEL AEHLGADIEA 240
  241 VRQGIGADPR IGYHFIYPGC GYGGSCFPKD MRALIHSAEQ AHCSSDLLQA VEAINRRQKH 300
  301 KLFERIRVFY DGDLRGKTFA LWGLAFKPNT DDMRDAPSRE LMEALWRHGA QVRAYDPEAM 360
  361 QETQRLYGHD ERLSLMGTPE ATLGGADALV ICTEWQQFKA PDFELLKERL KAPVIFDGRN 420
  421 LYDPERMARH GFHYYPMGRG QSCSLPINEA SLAQEDGVRL LRQA

Type	Start	End	Confidence
Signal Peptide	1	20	0.89
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	464	0.99