YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|126169303, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTPRIAFIG AGNMAASLIG GLRAQGVPAA QIRASDPGAE QRAKIAGEFA IDVVESNAEA  60
   61 VADADVVVLS VKPQAMKAVC QALAPALKPE QLIVSIAAGI PCASLEAWLG QPRPVVRCMP 120
  121 NTPALLRQGA SGLYANAQVS AAQREQAGQL LSAVGIALWL DDEAQIDAVT AVSGSGPAYF 180
  181 FLLMQAMTDA GEKLGLSRET ASRLTLQTAF GAAQMALSSE VEPAELRRRV TSPNGTTEAA 240
  241 IKSFQANGFE ALVEQALNAA SQRSAELAEQ LGQ

Type	Start	End	Confidence
Signal Peptide	1	24	0.89
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	273	0.98