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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|84324190, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.16
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRLQAVLLL CLACCWPGLA GALTLTRAWL AEHPSIRLGV DTSWPPFEYR DEQGRYQGLA  60
   61 AGYIGLLQER LGVSLTPVEP KTWTQVLEQA KDGRLNLLPG IMATPERQEY LSFTRPYLDF 120
  121 PIIILARKNG PMPKRIDELY GLKVAVVDHY APHELLIAQH PDLTLLPLPS VAAALQALAT 180
  181 GQADAFVGDF ASSVWNLRQL KLNGLEISGE TPYRYQLAMA VPRGQPILAG IVDKVLADLS 240
  241 AEEIERLQAP WVGGLLDRRP AWREMATYGL PIVLLILVSV AILLAMNRRL RREVSRRRQL 300
  301 ERELRDSEQH YRGLVESLNA IAWEMRLEEN RFTYVSPHAE RLLGYPLGEW LQPGFWQRTL 360
  361 HPMDAEYAIH YCMSESQAGR DHSFDYRMLA ADGRVVWIRD LVTPITQGRD LLLRGLMIDI 420
  421 TEAKLTEQAM RLSEQKFASV FHHCPDMVVL ANGADGRFLA VNSTFEQQIG IAADDAIGKT 480
  481 ATELGIWALP GLGPQVLEKL GHGNLTNLEV PLRRRNGSTF SALLSAQHVA LDQTPALVVV 540
  541 IRDITHLVET QELLRISEEK FANAFHAYPD GLLISHLEDG TLIDVNEGFT RLTGYRRDEV 600
  601 ISRSTLELGL WVDTEDRKRL ISLVRHHTLT QGFIAPVRDR NGGIRQCEMS AHRISIDGED 660
  661 CVLTIARDIT ERQLMQEKLQ QAATVFESTA EGVMITDTRQ RITAVNRAFS EITGYSEQEA 720
  721 LGRSPSLLSS GQHDSSFYLA MWNQLERDGH WQGEIWNRRK TGELYPEWLT ISAVHNPQGE 780
  781 ITHFVGVFAD ISTLKYAQAR LDYQAHHDPL TGLPNRLLFE SRLNHALDEA REESRPGAVL 840
  841 FIDLDRFKHI NDSLGHPIGD LLLKAIAERL RDQLRDVDTV ARLGGDEFII LLPGLHQESD 900
  901 AEHVARKLLN AFTAPFQADG HEFFVSASVG IALFPKDGDD APTLVKNADA AMYRAKSRGR 960
  961 SRIEYYTREL TYLATERMAL ETELRRALER DELQLYYQPK LSLESGLLVG AEALVRWYHP1020
 1021 LFGEISPERF IPLAEDCGLI LPLGDWVLEH ACQQMGEWQK LHAPFGPLSV NLAGAQLGQP1080
 1081 QLIERLEQLL EQSGLEPSRL QLEITESFIM NQTEEALAVL HGLKRLGVQL AIDDFGTGYS1140
 1141 SLSYLKRLPL DILKIDKSFI RGLPDDPHDA AITRAIIALG RSMQLTVIAE GVETEGQQSF1200
 1201 LTHEGCEQIQ GFVLSPPLPA ELFASKFLKP RQPIGAPREA PV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle