YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126197265, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAGGSGVAS LRGVSLRYGE TRAVDDVSLE IPANRMVGLI GPDGVGKSSL LALLAGARKM  60
   61 QDGEIRVLDG DMRDRRHRRA VCPRIAYMPQ GLGKNLYPTL SVFENVDFFG RLFGHDKAER 120
  121 ERRIADLLQS TGLAPFAERP AGKLSGGMKQ KLGLCCALIH DPDLLILDEP TTGVDPLSRN 180
  181 QFWELIGRIR AGREGMSVLV ASPTGGRRAL PLAGGDDDEV LATGTPQELR ERTGTQSLES 240
  241 AFIALLPESK RAGHHRLVIP PRPQSEGAPR IAIEAEGLTC RFGDFVAVDH VSFRIERGEI 300
  301 FGFLGSNGCG KSTTMKMLTG LLPASEGTCA LFGQPVDASD MATRRRVGYM SQAFSLYAEL 360
  361 SVWQNLVLHA RLFHLPADGI PARVGEMLRR FDLEKVADEL PNDLPLGIRQ RLSLAVAVIH 420
  421 KPEILILDEP TSGVDPVARD GFWELMVELS RRDGVTIFIS THFMNEAQRC DRISLMHAGK 480
  481 VLASDTPDEL VRQRGLPTLE ATFIAYLEEA AGAAAPAQPA EAPAVAEQPG DGQERQAQRE 540
  541 RFSPLRLFSY ARREAMELRR DPIRLTLALL GTALLMFIIG YGINMDVEDL SWAVLDRDQT 600
  601 TTSQAYALNI AGSRYFVEHA PITDPDDLDR RLRSGELSLA VEIPPNFGRD LKRGSDPAIG 660
  661 VWIDGAMPTR ANTVLGYVQG LHTSYLADLS RQAGGAEASA AASTEVRYRY NPDVESLKAM 720
  721 VPAVIPLLLI MIPAMLTALG VVREKELGSI TNLYVTPVTR LEFLVGKQLP YVAMGMINFL 780
  781 LMLVLAIVVF RVPLKGSFLA LTIGAFLYVV TSTGLGLFLS TFMRSQIAAV FGVAIATMIP 840
  841 AIQFSGLIHP VSSLEGAAAW IGKLYPTSHF LVVSRGAFSK SLGLSDLWAY YLPLAASIVV 900
  901 LTLLSVACLK KQED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle