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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|84323925
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDMANSPMN SSLAPERIDF NTPALQRKRR IRALKDRLTR WYVLVGGLAV LAAITLIFFY  60
   61 LAYVVLPLFR GADLETREAL TPAWMQQAQV PLLLSIEEQN QVAMRVGGQG EILFFNAKTG 120
  121 VELKRVALPL PAGSEIRSIA QDQPGSPTVA LGLSNGQVLV FQHTYKVTYP DNKKTITPEI 180
  181 AFPYGETPIG LDPQGRPLEH VSINAGDDSL LLAGSVDKQL LLLSMTREEN MLTGESTLDE 240
  241 ERIELPQIAE PVKAIYLDPR KQWLYVINGR ATADVFDLHS RQLNGRYKLL EDPNAEVTAS 300
  301 TQLLGGISLL VGDSKGGIAQ WFMARDTDGE PRLSHVRDFN LDGAPISAIA PEQRRKGFIA 360
  361 LDEKGNLGVF HSTAHRTLLV QPVADSSGVI TLSPRANRLL LEQGGKIHRF ALSNPHPEIS 420
  421 WSALWGKVWY ESYDKPAYVW QSTAATTDFE PKLSLSPLTF GTLKAAFYAM ILAAPLAIAA 480
  481 AVYTAYFMAP AMRRKVKPVI ELMEALPTVI LGFFAGLFLA PYVEGHLPGV FSLLLLTPLG 540
  541 ILLAGLLWSR LPERIRLSLP AGWEAALLIP VVLAVGAFAL WLSPHLETTF FGGDMRLWLS 600
  601 HDLGITYDQR NALIVGLAMG FAVIPNIFSI AEDAIFSVPR SLTYGSLALG ATPWQTLTRV 660
  661 VILTASPGIF SALMIGMGRA VGETMIVLMA TGNTPVMEVN IFEGMRTLAA NVAVEMPESE 720
  721 VGGSHYRVLF LSALVLLTFT FVMNTLAELI RQRLRKKYAS L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle