YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|194547545, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSTLSYTLG QLAAHVGAEL RGDADLPIQG LATLQEAGPA QLSFLANPQY RKYLPESRAG  60
   61 AVLLTAADAD GFAGTALVVA NPYLAYASLS HLFDRKPKAA AGIHPTAIVA ADAEVDPSAS 120
  121 VGAYAVIESG ARIGAGVSIG AHCVIGARSV IGEGGWLAPR VTLYHDVTIG ARVSIQSGAV 180
  181 IGGEGFGFAN EKGVWQKIAQ IGGVTIGDDV EIGANTTIDR GALSDTLIGN GVKLDNQIMI 240
  241 AHNVQIGDHT AMAACVGISG SAKIGRHCML AGGVGLVGHI EICDNVFVTG MTMVTRSITE 300
  301 PGSYSSGTAM QPAAEWKKSA ARIRQLDDMA RRLQQLEKRL AAVTSSGDAS SDA

Type	Start	End	Confidence
Signal Peptide	1	18	0.56
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	353	0.96